Proteomics Center Facility

TWO-DIMENSIONAL DIFFERENCE GEL ELECTROPHORESIS

Alban, A., David, S. O., Bjorkesten, L., Andersson, C. Sloge, E., Lewis, S. and Currin, I. (2003) A novel experimental design for comparative two-dimensional gel analysis: Two-dimensional difference gel electrophoresis incorporating a pooled internal standard. Proteomics 3, 36-44.

Candas, M., Loseva, O., Oppert, B., Kosaraju, P. and Bulla Jr., Lee A. (2003) Insect resistance to Bacillus thuringiensis. Mol. Cell. Proteomics 2, 19-28.

Hoffert, J. D., van Balkom, B. W., Chou, C. L. and Knepper, M. A. (2003) Application of difference gel electrophoresis to the identification of inner medullary collecting duct proteins. Am J. Physiol. Renal Physiol. 286, F170-179.

Gharbi, S., Gaffney, P., Yang, A., Zvelebil, M. J., Cramer, R., Warterfield, M. D. and Timms, J. F. (2002) Evaluation of two-dimensional differential gel electrophoresis for proteomic expression analysis of a model breast cancer cell system. Mol. Cell. Proteomics 1, 91-98

Kernec, F., Ünlü, M., Labeikovsky, W., Mindin, J. and Koretsky, A. P. (2001) Changes in the mitochrondrial proteome from mouse hearts deficient in creatine kinase. Physiol. Genomics 6, 117-128.

Knowles, M. R., Cervino, S., Skynner, H. A., Hunt, S. P., de Felipe, C., Salim, K., Meneses-Lorente, G., McAllister, G. and Guest, P. C. (2003) Multiplex proteomic analysis by two-dimensional differential in-gel electrophoresis. Proteomics 3, 1162-1171.

Patton, W. F. (2002) Detection technologies in proteome analysis. J. Chromatogr B Analyt Technol Biomed Life Sci. 771, 3-31.

Ruepp, S. U., Tonge, R., Shaw, J., Wallis, N. and Pognan, F. (2002) Genomics and proteomics analysis of acetaminophen toxicity in mouse liver. Toxic. Sciences 65, 135-150.

Shaw, J., Rowlinson, R. Nickson, J., Stone, T., Sweet, A., Williams, K. and Tonge, R. (2003) Evaluation of saturation labeling two-dimensional difference gel electrophoresis fluorescent dyes. Proteomics 3, 1181-1195.

Skynner, H. A., Rosahl, T. W., Knowles, M. R., Salim, K., Reid, L., Cothhliff, R., McAllister, G. and Guest, P. C. (2002) Alterations of stress related proteins in genetically altered mice revealed by two-dimensional differential in-gel electrophoresis analysis. Proteomics 2, 1018-1025.

Somiari, R. I., Sullivan, A., Russell, S., Somiari, S., Hu, H., Jordan, R., George, A., Katenhusen, R., Buchowiecka, A., Arciero, C., Brzeske, H., Hooke, J. and Shriver, C. (2003) High-throughput analysis of human infiltrating ductal carcinoma of the breast. Proteomics 3, 1863-1873.

Tonge, R., Shaw, J., Middleton, B., Rowlinson, R., Rayner, S., Young, J., Pognan, F., Hawkins, E., Currie, I. And Davison, M. (2001) Validation and development of fluorescence two-dimensional differential gel electrophoresis proteomics technology. Proteomics 1, 377-396

Ünlü, M., Morgan, M. E., Minden, J. S. (1997) Difference gel electrophoresis: A single gel method for detecting changes in protein extracts. Electrophoresis 18, 2071-2077.

Van den Bergh, G., Clerens, S., Cnops, L., Vandesande, and Arckens, L. (2003) Fluorescent two-dimensional difference gel electrophoresis and mass spectrometry identify age-related protein expression differences for the primary visual cortex of kitten and adult cat. J. Neurochem. 85, 193-205.

Voss, T. and Habert, P. (2000) Observations on the reproducibility and matching efficiency of two dimensional electrophoresis gels: Consequences for comprehensive data analysis. Electrophoresis 21, 3345-3350.

 Wulfkuhle, J. D., Sgroi, D. C., Krutzsch, H., McLean, K., McGarvey, K., Knowlton, M., Chen, S., Shu, H., Sahin, A., Kurek, R., Wallwiener, D., Merino, M. J., Petrocoin, E. F., Zhao, Y. and Steeg, R. S. (2002) Proteomics of human breast ductal carcinoma in situ. Cancer Res. 62, 6740-6749.

Yan, J. X., Devenish, A. T., Wait, R., Stone, T., Lewis, S. and Fowler, S. (2002) Fluorescence two-dimensional difference gel electrophoresis and mass spectrometry based proteomic analysis of Escherichia coli. Proteomics 2, 1682-1698.

Zhou, G., Li, H., DeCamp, D., Chen, S., Shu, H., Gong, Y., Flaig, M., Gillespie, J. W., Hu, N., Taylor, P. R., Emmert-Buck, M. R., Liotta, L., Petricoin III, E. F. and Zhao, Y. (2002) 2D differential in-gel electrophoresis for the identification of esophageal scans cell cancer-specific protein markers. Mol. Cell. Proteomics. 1, 117-124